Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6dO55057 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pde6dO55057 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pde6dO55057 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.1■□□□□ 0.17
Pde6dO55057 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.1■□□□□ 0.17
Pde6dO55057 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.1■□□□□ 0.17
Pde6dO55057 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pde6dO55057 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6dO55057 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6dO55057 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6dO55057 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pde6dO55057 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pde6dO55057 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pde6dO55057 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6dO55057 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6dO55057 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pde6dO55057 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pde6dO55057 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pde6dO55057 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6dO55057 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pde6dO55057 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pde6dO55057 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pde6dO55057 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pde6dO55057 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pde6dO55057 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pde6dO55057 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pde6dO55057 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.08■□□□□ 0.16
Pde6dO55057 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pde6dO55057 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pde6dO55057 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pde6dO55057 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.08■□□□□ 0.16
Pde6dO55057 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pde6dO55057 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pde6dO55057 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.07■□□□□ 0.16
Pde6dO55057 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pde6dO55057 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pde6dO55057 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pde6dO55057 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Pde6dO55057 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
Pde6dO55057 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.06■□□□□ 0.16
Pde6dO55057 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pde6dO55057 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.05■□□□□ 0.16
Pde6dO55057 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pde6dO55057 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pde6dO55057 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Gm45364-201ENSMUST00000210883 159 ntBASIC16.05■□□□□ 0.16
Pde6dO55057 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.05■□□□□ 0.16
Pde6dO55057 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pde6dO55057 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pde6dO55057 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pde6dO55057 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pde6dO55057 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms