Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm2O35900 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm2O35900 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm2O35900 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.27■□□□□ 0.51
Lsm2O35900 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.26■□□□□ 0.51
Lsm2O35900 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.26■□□□□ 0.51
Lsm2O35900 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm2O35900 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Lsm2O35900 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.26■□□□□ 0.51
Lsm2O35900 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm2O35900 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm2O35900 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm2O35900 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.25■□□□□ 0.51
Lsm2O35900 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.25■□□□□ 0.51
Lsm2O35900 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm2O35900 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm2O35900 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm2O35900 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm2O35900 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Lsm2O35900 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm2O35900 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm2O35900 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm2O35900 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm2O35900 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm2O35900 Scarna2-201ENSMUST00000157560 414 ntBASIC18.24■□□□□ 0.51
Lsm2O35900 Gm16437-201ENSMUST00000025669 507 ntBASIC18.24■□□□□ 0.51
Lsm2O35900 Gm9806-201ENSMUST00000051080 552 ntBASIC18.24■□□□□ 0.51
Lsm2O35900 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Lsm2O35900 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm2O35900 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.24■□□□□ 0.51
Lsm2O35900 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm2O35900 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lsm2O35900 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.23■□□□□ 0.51
Lsm2O35900 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lsm2O35900 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm2O35900 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.23■□□□□ 0.51
Lsm2O35900 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.23■□□□□ 0.51
Lsm2O35900 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm2O35900 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm2O35900 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm2O35900 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm2O35900 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm2O35900 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lsm2O35900 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm2O35900 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.22■□□□□ 0.51
Lsm2O35900 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm2O35900 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm2O35900 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm2O35900 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm2O35900 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm2O35900 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm2O35900 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm2O35900 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm2O35900 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.22■□□□□ 0.51
Lsm2O35900 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm2O35900 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.21■□□□□ 0.51
Lsm2O35900 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm2O35900 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm2O35900 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lsm2O35900 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm2O35900 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm2O35900 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm2O35900 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.2■□□□□ 0.5
Lsm2O35900 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Lsm2O35900 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm2O35900 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Lsm2O35900 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm2O35900 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm2O35900 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm2O35900 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm2O35900 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm2O35900 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm2O35900 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.19■□□□□ 0.5
Lsm2O35900 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Lsm2O35900 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm2O35900 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm2O35900 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm2O35900 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.18■□□□□ 0.5
Lsm2O35900 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm2O35900 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm2O35900 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm2O35900 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Lsm2O35900 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.17■□□□□ 0.5
Lsm2O35900 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms