Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clk4O35493 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.52■□□□□ 0.72
Clk4O35493 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Clk4O35493 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clk4O35493 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clk4O35493 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clk4O35493 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Clk4O35493 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clk4O35493 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
Clk4O35493 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clk4O35493 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clk4O35493 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Clk4O35493 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clk4O35493 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clk4O35493 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clk4O35493 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.5■□□□□ 0.71
Clk4O35493 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clk4O35493 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Clk4O35493 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clk4O35493 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clk4O35493 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clk4O35493 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clk4O35493 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clk4O35493 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clk4O35493 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clk4O35493 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.49■□□□□ 0.71
Clk4O35493 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clk4O35493 Gm22238-201ENSMUST00000175222 88 ntBASIC19.49■□□□□ 0.71
Clk4O35493 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clk4O35493 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.48■□□□□ 0.71
Clk4O35493 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Clk4O35493 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Clk4O35493 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clk4O35493 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Clk4O35493 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Clk4O35493 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk4O35493 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk4O35493 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk4O35493 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.47■□□□□ 0.71
Clk4O35493 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk4O35493 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clk4O35493 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.46■□□□□ 0.71
Clk4O35493 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clk4O35493 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Clk4O35493 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Clk4O35493 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clk4O35493 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clk4O35493 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk4O35493 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk4O35493 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk4O35493 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk4O35493 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.45■□□□□ 0.7
Clk4O35493 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Clk4O35493 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk4O35493 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk4O35493 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk4O35493 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.44■□□□□ 0.7
Clk4O35493 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk4O35493 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk4O35493 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.43■□□□□ 0.7
Clk4O35493 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.43■□□□□ 0.7
Clk4O35493 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.43■□□□□ 0.7
Clk4O35493 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk4O35493 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Clk4O35493 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.43■□□□□ 0.7
Clk4O35493 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.43■□□□□ 0.7
Clk4O35493 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clk4O35493 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Clk4O35493 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk4O35493 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk4O35493 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
Clk4O35493 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk4O35493 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk4O35493 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.42■□□□□ 0.7
Clk4O35493 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Clk4O35493 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clk4O35493 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clk4O35493 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.42■□□□□ 0.7
Clk4O35493 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk4O35493 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk4O35493 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk4O35493 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk4O35493 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms