Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm27454-201ENSMUST00000185090 204 ntBASIC18.81■□□□□ 0.6
Capn1O35350 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Capn1O35350 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Capn1O35350 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Capn1O35350 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Capn1O35350 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Capn1O35350 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.8■□□□□ 0.6
Capn1O35350 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Capn1O35350 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.8■□□□□ 0.6
Capn1O35350 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Capn1O35350 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Capn1O35350 Notumos-201ENSMUST00000151998 2659 ntBASIC18.79■□□□□ 0.6
Capn1O35350 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Capn1O35350 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.79■□□□□ 0.6
Capn1O35350 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Capn1O35350 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Capn1O35350 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Capn1O35350 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.79■□□□□ 0.6
Capn1O35350 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Capn1O35350 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Capn1O35350 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Capn1O35350 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Capn1O35350 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Capn1O35350 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.78■□□□□ 0.6
Capn1O35350 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Capn1O35350 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Capn1O35350 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Capn1O35350 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Capn1O35350 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Capn1O35350 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Capn1O35350 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Capn1O35350 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.77■□□□□ 0.6
Capn1O35350 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Capn1O35350 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Capn1O35350 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.76■□□□□ 0.59
Capn1O35350 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Capn1O35350 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Capn1O35350 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Capn1O35350 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capn1O35350 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Capn1O35350 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Capn1O35350 Gm45417-201ENSMUST00000209533 758 ntBASIC18.75■□□□□ 0.59
Capn1O35350 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Capn1O35350 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Capn1O35350 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Capn1O35350 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Capn1O35350 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capn1O35350 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capn1O35350 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Capn1O35350 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.74■□□□□ 0.59
Capn1O35350 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capn1O35350 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capn1O35350 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capn1O35350 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capn1O35350 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Capn1O35350 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capn1O35350 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.74■□□□□ 0.59
Capn1O35350 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.74■□□□□ 0.59
Capn1O35350 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Capn1O35350 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Capn1O35350 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capn1O35350 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capn1O35350 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Capn1O35350 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capn1O35350 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Capn1O35350 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.72■□□□□ 0.59
Capn1O35350 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.72■□□□□ 0.59
Capn1O35350 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capn1O35350 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capn1O35350 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Capn1O35350 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capn1O35350 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Capn1O35350 Serp2-204ENSMUST00000228055 705 ntBASIC18.71■□□□□ 0.59
Capn1O35350 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capn1O35350 Gm9870-201ENSMUST00000063874 645 ntBASIC18.71■□□□□ 0.59
Capn1O35350 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capn1O35350 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capn1O35350 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.71■□□□□ 0.59
Capn1O35350 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capn1O35350 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.7■□□□□ 0.58
Capn1O35350 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms