Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cx3cl1O35188 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cx3cl1O35188 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cx3cl1O35188 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.14■□□□□ 0.65
Cx3cl1O35188 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cx3cl1O35188 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cx3cl1O35188 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cx3cl1O35188 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.14■□□□□ 0.65
Cx3cl1O35188 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cx3cl1O35188 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cx3cl1O35188 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cx3cl1O35188 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Cx3cl1O35188 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.13■□□□□ 0.65
Cx3cl1O35188 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cx3cl1O35188 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.13■□□□□ 0.65
Cx3cl1O35188 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cx3cl1O35188 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cx3cl1O35188 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cx3cl1O35188 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cx3cl1O35188 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cx3cl1O35188 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cx3cl1O35188 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cx3cl1O35188 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cx3cl1O35188 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cx3cl1O35188 Gm7143-201ENSMUST00000222811 859 ntBASIC19.1■□□□□ 0.65
Cx3cl1O35188 Gm9870-201ENSMUST00000063874 645 ntBASIC19.1■□□□□ 0.65
Cx3cl1O35188 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cx3cl1O35188 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cx3cl1O35188 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.09■□□□□ 0.65
Cx3cl1O35188 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cx3cl1O35188 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cx3cl1O35188 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Cx3cl1O35188 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cx3cl1O35188 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cx3cl1O35188 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cx3cl1O35188 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cx3cl1O35188 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.09■□□□□ 0.65
Cx3cl1O35188 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cx3cl1O35188 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cx3cl1O35188 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Cx3cl1O35188 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.08■□□□□ 0.64
Cx3cl1O35188 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cx3cl1O35188 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cx3cl1O35188 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cx3cl1O35188 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cx3cl1O35188 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cx3cl1O35188 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cx3cl1O35188 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cx3cl1O35188 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.06■□□□□ 0.64
Cx3cl1O35188 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cx3cl1O35188 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cx3cl1O35188 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cx3cl1O35188 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cx3cl1O35188 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cx3cl1O35188 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cx3cl1O35188 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cx3cl1O35188 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Cx3cl1O35188 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cx3cl1O35188 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cx3cl1O35188 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cx3cl1O35188 Gm12922-201ENSMUST00000120626 809 ntBASIC19.05■□□□□ 0.64
Cx3cl1O35188 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
Cx3cl1O35188 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cx3cl1O35188 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cx3cl1O35188 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cx3cl1O35188 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.04■□□□□ 0.64
Cx3cl1O35188 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.04■□□□□ 0.64
Cx3cl1O35188 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.04■□□□□ 0.64
Cx3cl1O35188 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.04■□□□□ 0.64
Cx3cl1O35188 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cx3cl1O35188 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cx3cl1O35188 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Gm9847-201ENSMUST00000052528 599 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms