Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1bO08603 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1bO08603 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1bO08603 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.11■□□□□ 0.49
Raet1bO08603 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1bO08603 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1bO08603 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Raet1bO08603 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1bO08603 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1bO08603 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1bO08603 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.1■□□□□ 0.49
Raet1bO08603 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.1■□□□□ 0.49
Raet1bO08603 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.1■□□□□ 0.49
Raet1bO08603 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1bO08603 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1bO08603 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Raet1bO08603 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Raet1bO08603 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1bO08603 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1bO08603 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1bO08603 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1bO08603 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.09■□□□□ 0.49
Raet1bO08603 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.09■□□□□ 0.49
Raet1bO08603 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1bO08603 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1bO08603 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1bO08603 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1bO08603 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1bO08603 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Raet1bO08603 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1bO08603 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.08■□□□□ 0.48
Raet1bO08603 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1bO08603 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1bO08603 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.08■□□□□ 0.48
Raet1bO08603 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1bO08603 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1bO08603 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1bO08603 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1bO08603 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1bO08603 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1bO08603 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1bO08603 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1bO08603 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1bO08603 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Raet1bO08603 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.07■□□□□ 0.48
Raet1bO08603 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.07■□□□□ 0.48
Raet1bO08603 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Raet1bO08603 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Raet1bO08603 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1bO08603 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1bO08603 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1bO08603 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1bO08603 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1bO08603 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.05■□□□□ 0.48
Raet1bO08603 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1bO08603 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1bO08603 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Raet1bO08603 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Raet1bO08603 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Raet1bO08603 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Raet1bO08603 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1bO08603 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1bO08603 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1bO08603 Gm7417-201ENSMUST00000192950 473 ntBASIC18.03■□□□□ 0.48
Raet1bO08603 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Raet1bO08603 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.03■□□□□ 0.48
Raet1bO08603 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1bO08603 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1bO08603 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1bO08603 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1bO08603 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1bO08603 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Raet1bO08603 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Raet1bO08603 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Raet1bO08603 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1bO08603 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1bO08603 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms