Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.98■□□□□ 0.95
Atf6F6VAN0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf6F6VAN0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf6F6VAN0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Atf6F6VAN0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Atf6F6VAN0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf6F6VAN0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6F6VAN0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6F6VAN0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6F6VAN0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.96■□□□□ 0.95
Atf6F6VAN0 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.96■□□□□ 0.95
Atf6F6VAN0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6F6VAN0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6F6VAN0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atf6F6VAN0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Atf6F6VAN0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atf6F6VAN0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.95■□□□□ 0.94
Atf6F6VAN0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf6F6VAN0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf6F6VAN0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.94■□□□□ 0.94
Atf6F6VAN0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.94■□□□□ 0.94
Atf6F6VAN0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf6F6VAN0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atf6F6VAN0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Atf6F6VAN0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atf6F6VAN0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Atf6F6VAN0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Atf6F6VAN0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atf6F6VAN0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atf6F6VAN0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.91■□□□□ 0.94
Atf6F6VAN0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atf6F6VAN0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.91■□□□□ 0.94
Atf6F6VAN0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atf6F6VAN0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atf6F6VAN0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Atf6F6VAN0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atf6F6VAN0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Atf6F6VAN0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atf6F6VAN0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atf6F6VAN0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Atf6F6VAN0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atf6F6VAN0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.9■□□□□ 0.94
Atf6F6VAN0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atf6F6VAN0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atf6F6VAN0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Atf6F6VAN0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atf6F6VAN0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Atf6F6VAN0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atf6F6VAN0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.89■□□□□ 0.93
Atf6F6VAN0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atf6F6VAN0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atf6F6VAN0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atf6F6VAN0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atf6F6VAN0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atf6F6VAN0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atf6F6VAN0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Atf6F6VAN0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atf6F6VAN0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atf6F6VAN0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atf6F6VAN0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atf6F6VAN0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms