Protein–RNA interactions for Protein: E9Q492

Pgbd1, PiggyBac transposable element-derived 1, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pgbd1E9Q492 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pgbd1E9Q492 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.77■□□□□ 0.6
Pgbd1E9Q492 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pgbd1E9Q492 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pgbd1E9Q492 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pgbd1E9Q492 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.76■□□□□ 0.59
Pgbd1E9Q492 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Pgbd1E9Q492 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pgbd1E9Q492 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pgbd1E9Q492 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pgbd1E9Q492 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pgbd1E9Q492 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.75■□□□□ 0.59
Pgbd1E9Q492 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pgbd1E9Q492 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pgbd1E9Q492 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pgbd1E9Q492 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pgbd1E9Q492 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pgbd1E9Q492 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pgbd1E9Q492 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pgbd1E9Q492 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pgbd1E9Q492 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pgbd1E9Q492 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pgbd1E9Q492 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pgbd1E9Q492 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pgbd1E9Q492 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pgbd1E9Q492 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pgbd1E9Q492 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pgbd1E9Q492 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.71■□□□□ 0.59
Pgbd1E9Q492 Mir3960-201ENSMUST00000198213 73 ntBASIC18.71■□□□□ 0.59
Pgbd1E9Q492 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.71■□□□□ 0.59
Pgbd1E9Q492 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pgbd1E9Q492 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pgbd1E9Q492 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pgbd1E9Q492 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Pgbd1E9Q492 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pgbd1E9Q492 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pgbd1E9Q492 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pgbd1E9Q492 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pgbd1E9Q492 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pgbd1E9Q492 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pgbd1E9Q492 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pgbd1E9Q492 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.67■□□□□ 0.58
Pgbd1E9Q492 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.67■□□□□ 0.58
Pgbd1E9Q492 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pgbd1E9Q492 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms