Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sptbn4E9PX29 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn4E9PX29 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn4E9PX29 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sptbn4E9PX29 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn4E9PX29 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sptbn4E9PX29 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
Sptbn4E9PX29 Reep4-203ENSMUST00000226563 1444 ntBASIC18.78■□□□□ 0.6
Sptbn4E9PX29 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn4E9PX29 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn4E9PX29 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sptbn4E9PX29 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sptbn4E9PX29 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.77■□□□□ 0.6
Sptbn4E9PX29 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sptbn4E9PX29 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.77■□□□□ 0.59
Sptbn4E9PX29 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sptbn4E9PX29 Gm20049-201ENSMUST00000219950 730 ntBASIC18.77■□□□□ 0.59
Sptbn4E9PX29 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sptbn4E9PX29 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.76■□□□□ 0.59
Sptbn4E9PX29 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Gm10812-201ENSMUST00000099864 546 ntBASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sptbn4E9PX29 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Gm13234-201ENSMUST00000120010 747 ntBASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Gm11421-201ENSMUST00000122124 294 ntBASIC18.75■□□□□ 0.59
Sptbn4E9PX29 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sptbn4E9PX29 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.74■□□□□ 0.59
Sptbn4E9PX29 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.73■□□□□ 0.59
Sptbn4E9PX29 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.72■□□□□ 0.59
Sptbn4E9PX29 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sptbn4E9PX29 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sptbn4E9PX29 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptbn4E9PX29 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sptbn4E9PX29 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.71■□□□□ 0.59
Sptbn4E9PX29 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sptbn4E9PX29 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Sptbn4E9PX29 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptbn4E9PX29 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.71■□□□□ 0.59
Sptbn4E9PX29 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sptbn4E9PX29 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sptbn4E9PX29 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Sptbn4E9PX29 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Sptbn4E9PX29 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Sptbn4E9PX29 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Gm7514-201ENSMUST00000209475 934 ntBASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.7■□□□□ 0.58
Sptbn4E9PX29 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms