Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubr4A2AN08 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ubr4A2AN08 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ubr4A2AN08 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.12□□□□□ -0.63
Ubr4A2AN08 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ubr4A2AN08 Gm13234-201ENSMUST00000120010 747 ntBASIC11.12□□□□□ -0.63
Ubr4A2AN08 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ubr4A2AN08 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ubr4A2AN08 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC11.12□□□□□ -0.63
Ubr4A2AN08 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ubr4A2AN08 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ubr4A2AN08 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ubr4A2AN08 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ubr4A2AN08 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ubr4A2AN08 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.11□□□□□ -0.63
Ubr4A2AN08 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Gm43759-201ENSMUST00000196925 1261 ntBASIC11.11□□□□□ -0.63
Ubr4A2AN08 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.11□□□□□ -0.63
Ubr4A2AN08 Gm7514-201ENSMUST00000209475 934 ntBASIC11.11□□□□□ -0.63
Ubr4A2AN08 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Gm7063-201ENSMUST00000186840 981 ntBASIC11.11□□□□□ -0.63
Ubr4A2AN08 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.11□□□□□ -0.63
Ubr4A2AN08 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.11□□□□□ -0.63
Ubr4A2AN08 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ubr4A2AN08 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubr4A2AN08 Trmt13-210ENSMUST00000198454 880 ntBASIC11.1□□□□□ -0.63
Ubr4A2AN08 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Gm7367-201ENSMUST00000057611 492 ntBASIC11.09□□□□□ -0.63
Ubr4A2AN08 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ubr4A2AN08 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Ubr4A2AN08 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Gm10517-202ENSMUST00000192970 758 ntBASIC11.08□□□□□ -0.64
Ubr4A2AN08 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Gm7461-201ENSMUST00000058918 827 ntBASIC11.08□□□□□ -0.64
Ubr4A2AN08 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.08□□□□□ -0.64
Ubr4A2AN08 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ubr4A2AN08 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Gm43438-201ENSMUST00000198133 379 ntBASIC11.07□□□□□ -0.64
Ubr4A2AN08 Reep4-203ENSMUST00000226563 1444 ntBASIC11.07□□□□□ -0.64
Ubr4A2AN08 Gm5408-201ENSMUST00000197998 747 ntBASIC11.07□□□□□ -0.64
Ubr4A2AN08 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ubr4A2AN08 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms