Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-1A0N8R1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-1A0N8R1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-1A0N8R1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trav12-1A0N8R1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-1A0N8R1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-1A0N8R1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12-1A0N8R1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12-1A0N8R1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12-1A0N8R1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trav12-1A0N8R1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12-1A0N8R1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav12-1A0N8R1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav12-1A0N8R1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12-1A0N8R1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12-1A0N8R1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12-1A0N8R1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12-1A0N8R1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-1A0N8R1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12-1A0N8R1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12-1A0N8R1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12-1A0N8R1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12-1A0N8R1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Trav12-1A0N8R1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12-1A0N8R1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-1A0N8R1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-1A0N8R1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-1A0N8R1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.04■□□□□ 0.32
Trav12-1A0N8R1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-1A0N8R1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav12-1A0N8R1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav12-1A0N8R1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-1A0N8R1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-1A0N8R1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-1A0N8R1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12-1A0N8R1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12-1A0N8R1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12-1A0N8R1 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.02■□□□□ 0.32
Trav12-1A0N8R1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav12-1A0N8R1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trav12-1A0N8R1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms