Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv29A0A0G2LB96 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Gm12366-201ENSMUST00000121722 873 ntBASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Gm5786-201ENSMUST00000085368 882 ntBASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv29A0A0G2LB96 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv29A0A0G2LB96 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv29A0A0G2LB96 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trbv29A0A0G2LB96 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trbv29A0A0G2LB96 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.96■□□□□ 0.31
Trbv29A0A0G2LB96 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv29A0A0G2LB96 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv29A0A0G2LB96 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv29A0A0G2LB96 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv29A0A0G2LB96 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv29A0A0G2LB96 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv29A0A0G2LB96 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv29A0A0G2LB96 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trbv29A0A0G2LB96 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv29A0A0G2LB96 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms