Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav9-4A0A0B4J1K2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-4A0A0B4J1K2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-4A0A0B4J1K2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-4A0A0B4J1K2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav9-4A0A0B4J1K2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-4A0A0B4J1K2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9-4A0A0B4J1K2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Trav9-4A0A0B4J1K2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9-4A0A0B4J1K2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9-4A0A0B4J1K2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav9-4A0A0B4J1K2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9-4A0A0B4J1K2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9-4A0A0B4J1K2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9-4A0A0B4J1K2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav9-4A0A0B4J1K2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav9-4A0A0B4J1K2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav9-4A0A0B4J1K2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav9-4A0A0B4J1K2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav9-4A0A0B4J1K2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-4A0A0B4J1K2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav9-4A0A0B4J1K2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-4A0A0B4J1K2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-4A0A0B4J1K2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Gm22238-201ENSMUST00000175222 88 ntBASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-4A0A0B4J1K2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-4A0A0B4J1K2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav9-4A0A0B4J1K2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-4A0A0B4J1K2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.27■□□□□ 0.03
Trav9-4A0A0B4J1K2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav9-4A0A0B4J1K2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-4A0A0B4J1K2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-4A0A0B4J1K2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-4A0A0B4J1K2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-4A0A0B4J1K2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-4A0A0B4J1K2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Trav9-4A0A0B4J1K2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-4A0A0B4J1K2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav9-4A0A0B4J1K2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav9-4A0A0B4J1K2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-4A0A0B4J1K2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-4A0A0B4J1K2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms