Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav11A0A0B4J1J9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav11A0A0B4J1J9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav11A0A0B4J1J9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav11A0A0B4J1J9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav11A0A0B4J1J9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav11A0A0B4J1J9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav11A0A0B4J1J9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav11A0A0B4J1J9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms