Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.27■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tcrg-V4A0A0B4J1J8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Golph3-205ENSMUST00000228671 2842 ntBASIC15.27■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.26■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Gm22567-201ENSMUST00000175542 342 ntBASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tcrg-V4A0A0B4J1J8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms