Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv19A0A0B4J1H4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv19A0A0B4J1H4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv19A0A0B4J1H4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv19A0A0B4J1H4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv19A0A0B4J1H4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv19A0A0B4J1H4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv19A0A0B4J1H4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Trbv19A0A0B4J1H4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv19A0A0B4J1H4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv19A0A0B4J1H4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.36■□□□□ 0.21
Trbv19A0A0B4J1H4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv19A0A0B4J1H4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv19A0A0B4J1H4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv19A0A0B4J1H4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Gm10399-202ENSMUST00000202768 748 ntBASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv19A0A0B4J1H4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv19A0A0B4J1H4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.31■□□□□ 0.2
Trbv19A0A0B4J1H4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms