Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Cap2-205ENSMUST00000225824 1634 ntBASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv1-11A0A0A6YWI9 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ighv1-11A0A0A6YWI9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms