Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav6-5A0A075B6B5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-5A0A075B6B5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-5A0A075B6B5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-5A0A075B6B5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-5A0A075B6B5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-5A0A075B6B5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-5A0A075B6B5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-5A0A075B6B5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-5A0A075B6B5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.84■□□□□ 0.13
Trav6-5A0A075B6B5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-5A0A075B6B5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.83■□□□□ 0.13
Trav6-5A0A075B6B5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-5A0A075B6B5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-5A0A075B6B5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav6-5A0A075B6B5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-5A0A075B6B5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-5A0A075B6B5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav6-5A0A075B6B5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-5A0A075B6B5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-5A0A075B6B5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.8■□□□□ 0.12
Trav6-5A0A075B6B5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-5A0A075B6B5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-5A0A075B6B5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-5A0A075B6B5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-5A0A075B6B5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav6-5A0A075B6B5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-5A0A075B6B5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.77■□□□□ 0.12
Trav6-5A0A075B6B5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-5A0A075B6B5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-5A0A075B6B5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-5A0A075B6B5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-5A0A075B6B5 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.77■□□□□ 0.11
Trav6-5A0A075B6B5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-5A0A075B6B5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-5A0A075B6B5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-5A0A075B6B5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms