Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav6n-6A0A075B6B2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav6n-6A0A075B6B2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6n-6A0A075B6B2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6n-6A0A075B6B2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6n-6A0A075B6B2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6n-6A0A075B6B2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6n-6A0A075B6B2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.08■□□□□ 0
Trav6n-6A0A075B6B2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6n-6A0A075B6B2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6n-6A0A075B6B2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6n-6A0A075B6B2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav6n-6A0A075B6B2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6n-6A0A075B6B2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6n-6A0A075B6B2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6n-6A0A075B6B2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6n-6A0A075B6B2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6n-6A0A075B6B2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms