Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6n-7A0A075B6A6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6n-7A0A075B6A6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6n-7A0A075B6A6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-7A0A075B6A6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
Trav6n-7A0A075B6A6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-7A0A075B6A6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.34■□□□□ 0.37
Trav6n-7A0A075B6A6 Gm7143-201ENSMUST00000222811 859 ntBASIC17.34■□□□□ 0.37
Trav6n-7A0A075B6A6 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.34■□□□□ 0.37
Trav6n-7A0A075B6A6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-7A0A075B6A6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6n-7A0A075B6A6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6n-7A0A075B6A6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-7A0A075B6A6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-7A0A075B6A6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-7A0A075B6A6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav6n-7A0A075B6A6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav6n-7A0A075B6A6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trav6n-7A0A075B6A6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.32■□□□□ 0.36
Trav6n-7A0A075B6A6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-7A0A075B6A6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-7A0A075B6A6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-7A0A075B6A6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-7A0A075B6A6 Gm9870-201ENSMUST00000063874 645 ntBASIC17.31■□□□□ 0.36
Trav6n-7A0A075B6A6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-7A0A075B6A6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-7A0A075B6A6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-7A0A075B6A6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav6n-7A0A075B6A6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav6n-7A0A075B6A6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-7A0A075B6A6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-7A0A075B6A6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-7A0A075B6A6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-7A0A075B6A6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-7A0A075B6A6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-7A0A075B6A6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms