Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4d-3A0A075B625 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4d-3A0A075B625 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4d-3A0A075B625 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav4d-3A0A075B625 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Gm4799-201ENSMUST00000095396 657 ntBASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4d-3A0A075B625 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav4d-3A0A075B625 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4d-3A0A075B625 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4d-3A0A075B625 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms