Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav4n-4A0A075B615 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4n-4A0A075B615 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4n-4A0A075B615 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav4n-4A0A075B615 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4n-4A0A075B615 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.15
Trav4n-4A0A075B615 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trav4n-4A0A075B615 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4n-4A0A075B615 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms