Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-54A0A075B5W5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-54A0A075B5W5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-54A0A075B5W5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ighv1-54A0A075B5W5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-54A0A075B5W5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.27■□□□□ 0.52
Ighv1-54A0A075B5W5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ighv1-54A0A075B5W5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-54A0A075B5W5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ighv1-54A0A075B5W5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-54A0A075B5W5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ighv1-54A0A075B5W5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.27■□□□□ 0.51
Ighv1-54A0A075B5W5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-54A0A075B5W5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-54A0A075B5W5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.26■□□□□ 0.51
Ighv1-54A0A075B5W5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.26■□□□□ 0.51
Ighv1-54A0A075B5W5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-54A0A075B5W5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-54A0A075B5W5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-54A0A075B5W5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-54A0A075B5W5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ighv1-54A0A075B5W5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-54A0A075B5W5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-54A0A075B5W5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-54A0A075B5W5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-54A0A075B5W5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-54A0A075B5W5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-54A0A075B5W5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-54A0A075B5W5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.24■□□□□ 0.51
Ighv1-54A0A075B5W5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-54A0A075B5W5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-54A0A075B5W5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ighv1-54A0A075B5W5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-54A0A075B5W5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ighv1-54A0A075B5W5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ighv1-54A0A075B5W5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-54A0A075B5W5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ighv1-54A0A075B5W5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-54A0A075B5W5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-54A0A075B5W5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-54A0A075B5W5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-54A0A075B5W5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-54A0A075B5W5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-54A0A075B5W5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
Ighv1-54A0A075B5W5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Ighv1-54A0A075B5W5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-54A0A075B5W5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-54A0A075B5W5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-54A0A075B5W5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-54A0A075B5W5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-54A0A075B5W5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-54A0A075B5W5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-54A0A075B5W5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-54A0A075B5W5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ighv1-54A0A075B5W5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-54A0A075B5W5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms