Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Gm8100-201ENSMUST00000182906 988 ntBASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Gm45186-201ENSMUST00000206874 478 ntBASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Gm10288-201ENSMUST00000084614 537 ntBASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cldn9Q9Z0S7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Gm14017-201ENSMUST00000121934 386 ntBASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Gm6867-201ENSMUST00000219165 425 ntBASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cldn9Q9Z0S7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cldn9Q9Z0S7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cldn9Q9Z0S7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cldn9Q9Z0S7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms