Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm4294-201ENSMUST00000105169 614 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm7741-201ENSMUST00000181445 989 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm4654-201ENSMUST00000183305 982 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Mir8115-201ENSMUST00000184992 119 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm43852-201ENSMUST00000202098 917 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk3aQ9JKX8 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm13611-201ENSMUST00000118269 318 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm23045-201ENSMUST00000175041 96 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm17831-201ENSMUST00000205579 900 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm45856-201ENSMUST00000212752 416 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk3aQ9JKX8 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk3aQ9JKX8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms