Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm13600-201ENSMUST00000117949 744 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm14219-201ENSMUST00000120414 288 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm25053-201ENSMUST00000103982 133 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm25922-201ENSMUST00000104281 130 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm14213-201ENSMUST00000119778 768 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm24679-201ENSMUST00000158762 111 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm25053-202ENSMUST00000199731 132 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Gm8420-201ENSMUST00000097103 598 ntBASIC11.43□□□□□ -0.58
OtofQ9ESF1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
OtofQ9ESF1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm9673-201ENSMUST00000119287 781 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm22379-201ENSMUST00000157480 131 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm43966-201ENSMUST00000203301 612 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm19091-201ENSMUST00000208120 978 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.42□□□□□ -0.58
OtofQ9ESF1 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
OtofQ9ESF1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtofQ9ESF1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtofQ9ESF1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
OtofQ9ESF1 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
OtofQ9ESF1 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms