Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.58□□□□□ -0.23
Smc3Q9CW03 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Smc3Q9CW03 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smc3Q9CW03 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.58□□□□□ -0.23
Smc3Q9CW03 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm24255-201ENSMUST00000104481 128 ntBASIC13.58□□□□□ -0.24
Smc3Q9CW03 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm11500-201ENSMUST00000118237 601 ntBASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm38341-201ENSMUST00000195357 515 ntBASIC13.58□□□□□ -0.24
Smc3Q9CW03 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.58□□□□□ -0.24
Smc3Q9CW03 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.58□□□□□ -0.24
Smc3Q9CW03 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.58□□□□□ -0.24
Smc3Q9CW03 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.58□□□□□ -0.24
Smc3Q9CW03 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gm14381-201ENSMUST00000122105 414 ntBASIC13.57□□□□□ -0.24
Smc3Q9CW03 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gm8343-201ENSMUST00000182705 994 ntBASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gm38317-201ENSMUST00000195564 343 ntBASIC13.57□□□□□ -0.24
Smc3Q9CW03 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gm43966-201ENSMUST00000203301 612 ntBASIC13.57□□□□□ -0.24
Smc3Q9CW03 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gm13097-201ENSMUST00000210722 397 ntBASIC13.57□□□□□ -0.24
Smc3Q9CW03 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smc3Q9CW03 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.56□□□□□ -0.24
Smc3Q9CW03 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Gm5616-201ENSMUST00000165252 384 ntBASIC13.56□□□□□ -0.24
Smc3Q9CW03 Gm8741-201ENSMUST00000174736 384 ntBASIC13.56□□□□□ -0.24
Smc3Q9CW03 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.56□□□□□ -0.24
Smc3Q9CW03 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms