Protein–RNA interactions for Protein: Q9CUH1

4930553M12Rik, RIKEN cDNA 4930553M12 gene (Fragment), mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930553M12RikQ9CUH1 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Gm23251-201ENSMUST00000103773 110 ntBASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Gm13916-201ENSMUST00000117368 628 ntBASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Gm13809-201ENSMUST00000117921 597 ntBASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
4930553M12RikQ9CUH1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gm26461-201ENSMUST00000175064 290 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gm38151-201ENSMUST00000195085 289 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gm6108-201ENSMUST00000208365 367 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gm1821-202ENSMUST00000227415 750 ntBASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
4930553M12RikQ9CUH1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
4930553M12RikQ9CUH1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms