Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Gm6114-201ENSMUST00000182472 968 ntBASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Gm30285-201ENSMUST00000214614 422 ntBASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ska1Q9CPV1 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Mir7085-201ENSMUST00000184353 66 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm3096-201ENSMUST00000185770 364 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm9230-201ENSMUST00000188228 532 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm38314-201ENSMUST00000195709 625 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm19994-201ENSMUST00000217086 586 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Gm9368-201ENSMUST00000219348 831 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ska1Q9CPV1 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.96□□□□□ -0.65
Ska1Q9CPV1 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ska1Q9CPV1 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ska1Q9CPV1 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ska1Q9CPV1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ska1Q9CPV1 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ska1Q9CPV1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Ska1Q9CPV1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Ska1Q9CPV1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ska1Q9CPV1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms