Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm14497-201ENSMUST00000119537 580 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm18801-201ENSMUST00000186616 536 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm29067-201ENSMUST00000190821 470 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm29763-201ENSMUST00000205306 616 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm5599-201ENSMUST00000209602 788 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 BC106175-202ENSMUST00000219344 1213 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm5178-201ENSMUST00000219380 898 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.24□□□□□ -0.45
Clp1Q99LI9 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm11996-201ENSMUST00000117538 915 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm15620-201ENSMUST00000122949 270 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm37852-201ENSMUST00000193027 350 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm37365-201ENSMUST00000193109 409 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm45856-201ENSMUST00000212752 416 ntBASIC12.23□□□□□ -0.45
Clp1Q99LI9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.23□□□□□ -0.45
Clp1Q99LI9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clp1Q99LI9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clp1Q99LI9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms