Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm42499-201ENSMUST00000196193 1412 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm9133-201ENSMUST00000118289 540 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm15374-201ENSMUST00000119313 844 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm15746-201ENSMUST00000120684 1027 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm23647-201ENSMUST00000175042 109 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Rn5s-201ENSMUST00000177555 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s108-201ENSMUST00000177575 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s121-201ENSMUST00000177589 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s146-201ENSMUST00000177889 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm22109-201ENSMUST00000177995 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm22291-201ENSMUST00000178027 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s141-201ENSMUST00000178066 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm23284-201ENSMUST00000178069 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s100-201ENSMUST00000178106 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s111-201ENSMUST00000178203 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s105-201ENSMUST00000178499 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s149-201ENSMUST00000178520 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s103-201ENSMUST00000178755 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s123-201ENSMUST00000178804 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s142-201ENSMUST00000178820 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s144-201ENSMUST00000178859 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s139-201ENSMUST00000178975 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s134-201ENSMUST00000178983 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s136-201ENSMUST00000179080 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm25018-201ENSMUST00000179081 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s104-201ENSMUST00000179107 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s113-201ENSMUST00000179143 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s133-201ENSMUST00000179275 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s117-201ENSMUST00000179431 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm25212-201ENSMUST00000179432 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s138-201ENSMUST00000179476 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s122-201ENSMUST00000179500 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s143-201ENSMUST00000179542 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s107-201ENSMUST00000179704 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm26391-201ENSMUST00000179843 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s110-201ENSMUST00000179995 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s128-201ENSMUST00000180096 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 n-R5s124-201ENSMUST00000180334 119 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm17944-201ENSMUST00000186351 643 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm20781-201ENSMUST00000193154 693 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm21736-201ENSMUST00000195399 693 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm30946-201ENSMUST00000198288 724 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 AC158986.2-201ENSMUST00000227487 618 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gm24089-201ENSMUST00000093696 109 ntBASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ddx54Q8K4L0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 AC166361.2-201ENSMUST00000219269 1415 ntBASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm13281-201ENSMUST00000120871 567 ntBASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Zcwpw2-203ENSMUST00000187803 372 ntBASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm18001-201ENSMUST00000212023 688 ntBASIC15.1■□□□□ 0.01
Ddx54Q8K4L0 Gm5178-201ENSMUST00000219380 898 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms