Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm26927-201ENSMUST00000182385 965 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm37201-201ENSMUST00000191845 523 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm9908-201ENSMUST00000211534 448 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ebf4Q8K4J2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ebf4Q8K4J2 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms