Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm18734-201ENSMUST00000172937 808 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Mir8093-201ENSMUST00000185043 137 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm4482-201ENSMUST00000200876 742 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm45113-201ENSMUST00000207518 165 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.93□□□□□ -0.66
Clrn1Q8K445 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Clrn1Q8K445 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm13035-201ENSMUST00000117496 342 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm13461-201ENSMUST00000120980 662 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm11450-201ENSMUST00000121144 333 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm8199-201ENSMUST00000121323 823 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm5733-201ENSMUST00000190232 939 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm43002-201ENSMUST00000200310 155 ntBASIC10.92□□□□□ -0.66
Clrn1Q8K445 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Clrn1Q8K445 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Gm13916-201ENSMUST00000117368 628 ntBASIC10.91□□□□□ -0.66
Clrn1Q8K445 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.91□□□□□ -0.66
Clrn1Q8K445 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms