Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm5745-201ENSMUST00000183748 313 ntBASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Mir8093-201ENSMUST00000185043 137 ntBASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm5982-201ENSMUST00000196234 512 ntBASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lysmd4Q8CC84 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm28937-201ENSMUST00000185413 695 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm29400-201ENSMUST00000187208 695 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm28662-201ENSMUST00000188446 695 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm28251-201ENSMUST00000188835 695 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm38002-201ENSMUST00000193255 180 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm37318-201ENSMUST00000194325 695 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm38017-201ENSMUST00000194768 695 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm37287-201ENSMUST00000195449 695 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm37793-201ENSMUST00000195548 695 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm5455-201ENSMUST00000058710 715 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lysmd4Q8CC84 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms