Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.71□□□□□ -0.85
Tsen54Q8C2A2 Gm10434-201ENSMUST00000101158 471 ntBASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm11793-201ENSMUST00000120433 981 ntBASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm38092-201ENSMUST00000195600 653 ntBASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm43118-201ENSMUST00000199149 775 ntBASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tsen54Q8C2A2 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Mospd4-201ENSMUST00000180618 576 ntBASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.7□□□□□ -0.86
Tsen54Q8C2A2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms