Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cpsf4Q8BQZ5 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Gm12266-201ENSMUST00000120311 962 ntBASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Mir6979-201ENSMUST00000183927 56 ntBASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Gm270-201ENSMUST00000223010 976 ntBASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.23□□□□□ -0.61
Cpsf4Q8BQZ5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm26286-201ENSMUST00000104166 134 ntBASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm11511-201ENSMUST00000118146 540 ntBASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm11700-201ENSMUST00000119409 403 ntBASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cpsf4Q8BQZ5 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Cpsf4Q8BQZ5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms