Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm29615-201ENSMUST00000185371 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm28224-201ENSMUST00000186078 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm29001-201ENSMUST00000186177 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm28292-201ENSMUST00000186593 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm28101-201ENSMUST00000187608 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm29076-201ENSMUST00000187689 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm28302-201ENSMUST00000187931 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm28646-201ENSMUST00000188220 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm28205-201ENSMUST00000189177 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm29032-201ENSMUST00000189797 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm28695-201ENSMUST00000190300 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm37448-201ENSMUST00000192795 697 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm19187-201ENSMUST00000206781 892 ntBASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sh3rf1Q69ZI1 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sh3rf1Q69ZI1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Mir1943-201ENSMUST00000158276 73 ntBASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm17040-202ENSMUST00000170597 889 ntBASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm24514-201ENSMUST00000174961 285 ntBASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm27627-201ENSMUST00000183644 150 ntBASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sh3rf1Q69ZI1 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.76□□□□□ -0.53
Sh3rf1Q69ZI1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sh3rf1Q69ZI1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms