Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col19a1Q0VF58 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col19a1Q0VF58 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm22495-201ENSMUST00000104492 126 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm16209-201ENSMUST00000118457 627 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm10171-201ENSMUST00000126220 628 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm8226-201ENSMUST00000190511 798 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm10233-201ENSMUST00000089275 628 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Col19a1Q0VF58 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Paupar-201ENSMUST00000194826 3482 ntBASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gm25148-201ENSMUST00000104611 123 ntBASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gm27444-201ENSMUST00000184157 137 ntBASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col19a1Q0VF58 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms