Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Npas1P97459 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.72□□□□□ -0.85
Npas1P97459 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Npas1P97459 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.72□□□□□ -0.85
Npas1P97459 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Npas1P97459 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.72□□□□□ -0.85
Npas1P97459 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.72□□□□□ -0.85
Npas1P97459 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.72□□□□□ -0.85
Npas1P97459 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.72□□□□□ -0.85
Npas1P97459 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.72□□□□□ -0.85
Npas1P97459 Gm7809-201ENSMUST00000153199 742 ntBASIC9.72□□□□□ -0.85
Npas1P97459 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Npas1P97459 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.72□□□□□ -0.85
Npas1P97459 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Gm18584-201ENSMUST00000203098 964 ntBASIC9.72□□□□□ -0.85
Npas1P97459 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.72□□□□□ -0.85
Npas1P97459 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Npas1P97459 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Npas1P97459 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Npas1P97459 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Npas1P97459 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.72□□□□□ -0.85
Npas1P97459 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Npas1P97459 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Npas1P97459 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Npas1P97459 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Npas1P97459 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.71□□□□□ -0.85
Npas1P97459 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.71□□□□□ -0.85
Npas1P97459 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Npas1P97459 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Npas1P97459 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Npas1P97459 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Npas1P97459 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Gm3890-201ENSMUST00000182416 207 ntBASIC9.71□□□□□ -0.86
Npas1P97459 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.71□□□□□ -0.86
Npas1P97459 Gm45930-201ENSMUST00000221330 292 ntBASIC9.71□□□□□ -0.86
Npas1P97459 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Npas1P97459 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Npas1P97459 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Npas1P97459 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
Npas1P97459 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.71□□□□□ -0.86
Npas1P97459 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Npas1P97459 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms