Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm37826-201ENSMUST00000195329 322 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm5982-201ENSMUST00000196234 512 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm13204-201ENSMUST00000120110 821 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm9089-201ENSMUST00000122027 526 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC10.73□□□□□ -0.69
Cacna1aP97445 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.73□□□□□ -0.69
Cacna1aP97445 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm4978-201ENSMUST00000071565 801 ntBASIC10.73□□□□□ -0.69
Cacna1aP97445 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.73□□□□□ -0.69
Cacna1aP97445 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cacna1aP97445 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.72□□□□□ -0.69
Cacna1aP97445 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm22379-201ENSMUST00000157480 131 ntBASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm6114-201ENSMUST00000182472 968 ntBASIC10.72□□□□□ -0.69
Cacna1aP97445 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Cacna1aP97445 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.72□□□□□ -0.69
Cacna1aP97445 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm12274-201ENSMUST00000120062 385 ntBASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Gm18123-201ENSMUST00000210874 822 ntBASIC10.72□□□□□ -0.69
Cacna1aP97445 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.72□□□□□ -0.69
Cacna1aP97445 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.72□□□□□ -0.69
Cacna1aP97445 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cacna1aP97445 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms