Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CiitaP79621 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CiitaP79621 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CiitaP79621 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.56□□□□□ -0.4
CiitaP79621 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CiitaP79621 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.56□□□□□ -0.4
CiitaP79621 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CiitaP79621 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.55□□□□□ -0.4
CiitaP79621 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CiitaP79621 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CiitaP79621 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CiitaP79621 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.55□□□□□ -0.4
CiitaP79621 Gm37905-201ENSMUST00000195310 341 ntBASIC12.55□□□□□ -0.4
CiitaP79621 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CiitaP79621 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CiitaP79621 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.54□□□□□ -0.4
CiitaP79621 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.54□□□□□ -0.4
CiitaP79621 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.54□□□□□ -0.4
CiitaP79621 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.54□□□□□ -0.4
CiitaP79621 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.54□□□□□ -0.4
CiitaP79621 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Gm25492-201ENSMUST00000157383 129 ntBASIC12.54□□□□□ -0.4
CiitaP79621 Gm44158-201ENSMUST00000203881 505 ntBASIC12.54□□□□□ -0.4
CiitaP79621 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CiitaP79621 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.54□□□□□ -0.4
CiitaP79621 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.54□□□□□ -0.4
CiitaP79621 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CiitaP79621 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms