Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm3828-201ENSMUST00000121817 257 ntBASIC12.19□□□□□ -0.46
NcanP55066 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.19□□□□□ -0.46
NcanP55066 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.19□□□□□ -0.46
NcanP55066 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.19□□□□□ -0.46
NcanP55066 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Gm5507-201ENSMUST00000091897 1008 ntBASIC12.19□□□□□ -0.46
NcanP55066 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.19□□□□□ -0.46
NcanP55066 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.19□□□□□ -0.46
NcanP55066 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NcanP55066 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.19□□□□□ -0.46
NcanP55066 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NcanP55066 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NcanP55066 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.18□□□□□ -0.46
NcanP55066 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Gm14071-201ENSMUST00000117817 509 ntBASIC12.18□□□□□ -0.46
NcanP55066 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Gm16547-201ENSMUST00000159474 293 ntBASIC12.18□□□□□ -0.46
NcanP55066 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.18□□□□□ -0.46
NcanP55066 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.18□□□□□ -0.46
NcanP55066 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.18□□□□□ -0.46
NcanP55066 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Gm7242-201ENSMUST00000221134 705 ntBASIC12.18□□□□□ -0.46
NcanP55066 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.18□□□□□ -0.46
NcanP55066 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NcanP55066 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.18□□□□□ -0.46
NcanP55066 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NcanP55066 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NcanP55066 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NcanP55066 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NcanP55066 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.17□□□□□ -0.46
NcanP55066 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NcanP55066 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.17□□□□□ -0.46
NcanP55066 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Gm5529-201ENSMUST00000165691 891 ntBASIC12.17□□□□□ -0.46
NcanP55066 Zfp419-201ENSMUST00000173446 916 ntBASIC12.17□□□□□ -0.46
NcanP55066 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NcanP55066 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.17□□□□□ -0.46
NcanP55066 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.17□□□□□ -0.46
NcanP55066 Gm5178-201ENSMUST00000219380 898 ntBASIC12.17□□□□□ -0.46
NcanP55066 AC161374.2-201ENSMUST00000223662 596 ntBASIC12.17□□□□□ -0.46
NcanP55066 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms