Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.59□□□□□ -0.87
Nkx2-1P50220 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Nkx2-1P50220 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Nkx2-1P50220 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.58□□□□□ -0.88
Nkx2-1P50220 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.58□□□□□ -0.88
Nkx2-1P50220 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Gm5419-201ENSMUST00000119301 527 ntBASIC9.58□□□□□ -0.88
Nkx2-1P50220 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.58□□□□□ -0.88
Nkx2-1P50220 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Gm9996-201ENSMUST00000070359 913 ntBASIC9.58□□□□□ -0.88
Nkx2-1P50220 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.58□□□□□ -0.88
Nkx2-1P50220 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.58□□□□□ -0.88
Nkx2-1P50220 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Nkx2-1P50220 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nkx2-1P50220 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.57□□□□□ -0.88
Nkx2-1P50220 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm10434-201ENSMUST00000101158 471 ntBASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.57□□□□□ -0.88
Nkx2-1P50220 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms