Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm13996-201ENSMUST00000118456 430 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.21□□□□□ -0.13
Nkx1-2P42580 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm25890-201ENSMUST00000177643 165 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm22614-201ENSMUST00000178300 165 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm37666-201ENSMUST00000194110 866 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm8913-201ENSMUST00000209491 641 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm45331-201ENSMUST00000209868 554 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm22042-201ENSMUST00000082989 165 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm26110-201ENSMUST00000083971 165 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.21□□□□□ -0.13
Nkx1-2P42580 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx1-2P42580 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Nkx1-2P42580 Gm45161-201ENSMUST00000207316 2263 ntBASIC14.21□□□□□ -0.14
Nkx1-2P42580 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx1-2P42580 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC14.21□□□□□ -0.14
Nkx1-2P42580 Gm43127-201ENSMUST00000195890 2789 ntBASIC14.21□□□□□ -0.14
Nkx1-2P42580 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nkx1-2P42580 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx1-2P42580 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Nkx1-2P42580 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm13665-201ENSMUST00000120830 528 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm7584-201ENSMUST00000175829 940 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm8343-201ENSMUST00000182705 994 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm6450-201ENSMUST00000200896 574 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gm17812-201ENSMUST00000204935 318 ntBASIC14.2□□□□□ -0.14
Nkx1-2P42580 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx1-2P42580 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx1-2P42580 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.19□□□□□ -0.14
Nkx1-2P42580 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms