Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.17□□□□□ -0.46
Usp4P35123 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Usp4P35123 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp4P35123 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp4P35123 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Usp4P35123 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.16□□□□□ -0.46
Usp4P35123 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Usp4P35123 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp4P35123 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.16□□□□□ -0.46
Usp4P35123 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Usp4P35123 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Usp4P35123 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp4P35123 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Usp4P35123 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.15□□□□□ -0.46
Usp4P35123 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Usp4P35123 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.15□□□□□ -0.46
Usp4P35123 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Usp4P35123 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.15□□□□□ -0.46
Usp4P35123 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Usp4P35123 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.15□□□□□ -0.46
Usp4P35123 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.15□□□□□ -0.46
Usp4P35123 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Usp4P35123 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.15□□□□□ -0.46
Usp4P35123 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.15□□□□□ -0.46
Usp4P35123 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Usp4P35123 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.15□□□□□ -0.46
Usp4P35123 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.15□□□□□ -0.46
Usp4P35123 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Gm6439-201ENSMUST00000199849 862 ntBASIC12.15□□□□□ -0.46
Usp4P35123 Gm44651-201ENSMUST00000207343 372 ntBASIC12.15□□□□□ -0.46
Usp4P35123 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.15□□□□□ -0.46
Usp4P35123 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Usp4P35123 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp4P35123 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.15□□□□□ -0.46
Usp4P35123 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms