Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm23912-201ENSMUST00000104687 87 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.98□□□□□ -0.81
Slc6a1P31648 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm6023-201ENSMUST00000118217 606 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm11700-201ENSMUST00000119409 403 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.98□□□□□ -0.81
Slc6a1P31648 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm29396-201ENSMUST00000185659 716 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm18935-201ENSMUST00000212692 664 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm9368-201ENSMUST00000219348 831 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Slc6a1P31648 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.98□□□□□ -0.81
Slc6a1P31648 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.98□□□□□ -0.81
Slc6a1P31648 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Slc6a1P31648 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.97□□□□□ -0.81
Slc6a1P31648 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Slc6a1P31648 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.97□□□□□ -0.81
Slc6a1P31648 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Slc6a1P31648 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.97□□□□□ -0.81
Slc6a1P31648 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.97□□□□□ -0.81
Slc6a1P31648 Gm13786-201ENSMUST00000122371 333 ntBASIC9.97□□□□□ -0.81
Slc6a1P31648 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Gm25261-201ENSMUST00000157416 134 ntBASIC9.97□□□□□ -0.81
Slc6a1P31648 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.97□□□□□ -0.81
Slc6a1P31648 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.97□□□□□ -0.81
Slc6a1P31648 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Slc6a1P31648 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Slc6a1P31648 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Slc6a1P31648 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Slc6a1P31648 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Slc6a1P31648 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms