Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC134601.2-201ENSMUST00000221071 130 ntBASIC13.43□□□□□ -0.26
Col1a1P11087 AC169511.1-201ENSMUST00000227639 995 ntBASIC13.43□□□□□ -0.26
Col1a1P11087 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col1a1P11087 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col1a1P11087 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col1a1P11087 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.43□□□□□ -0.26
Col1a1P11087 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col1a1P11087 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC13.43□□□□□ -0.26
Col1a1P11087 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col1a1P11087 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.42□□□□□ -0.26
Col1a1P11087 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm23255-201ENSMUST00000102244 110 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm23769-201ENSMUST00000104441 121 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm7238-201ENSMUST00000206467 973 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col1a1P11087 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm43167-201ENSMUST00000202001 1606 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Col1a1P11087 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm12912-201ENSMUST00000121596 1381 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm4917-201ENSMUST00000121452 650 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm37207-201ENSMUST00000194284 296 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.42□□□□□ -0.26
Col1a1P11087 AC174797.2-201ENSMUST00000225835 165 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col1a1P11087 Gm10580-201ENSMUST00000097985 396 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm10582-201ENSMUST00000097987 396 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Gm10583-201ENSMUST00000097988 396 ntBASIC13.42□□□□□ -0.26
Col1a1P11087 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col1a1P11087 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms