Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm26013-201ENSMUST00000104404 119 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm12795-201ENSMUST00000117594 539 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Mir1956-201ENSMUST00000157748 65 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm42518-201ENSMUST00000196277 938 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm42657-201ENSMUST00000201746 211 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm44315-201ENSMUST00000203041 219 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.85□□□□□ -0.51
Rc3h2P0C090 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rc3h2P0C090 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Gm11960-201ENSMUST00000122068 925 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Mir6998-201ENSMUST00000183343 64 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 Gm28324-201ENSMUST00000187913 264 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Gm37905-201ENSMUST00000195310 341 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 Gm7504-201ENSMUST00000201449 424 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.84□□□□□ -0.51
Rc3h2P0C090 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rc3h2P0C090 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms