Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
P06320 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
P06320 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
P06320 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Gm18986-201ENSMUST00000216029 1986 ntBASIC7.29□□□□□ -1.24
P06320 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC7.29□□□□□ -1.24
P06320 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
P06320 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC7.29□□□□□ -1.24
P06320 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
P06320 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC7.29□□□□□ -1.24
P06320 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
P06320 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC7.29□□□□□ -1.24
P06320 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
P06320 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
P06320 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
P06320 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Gm12859-201ENSMUST00000117834 427 ntBASIC7.29□□□□□ -1.24
P06320 Gm11700-201ENSMUST00000119409 403 ntBASIC7.29□□□□□ -1.24
P06320 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC7.29□□□□□ -1.24
P06320 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
P06320 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
P06320 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
P06320 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
P06320 Gm5706-201ENSMUST00000181525 993 ntBASIC7.29□□□□□ -1.24
P06320 Mir7023-201ENSMUST00000185093 64 ntBASIC7.29□□□□□ -1.24
P06320 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Gm28911-201ENSMUST00000188837 117 ntBASIC7.29□□□□□ -1.24
P06320 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC7.29□□□□□ -1.24
P06320 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC7.29□□□□□ -1.24
P06320 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC7.29□□□□□ -1.24
P06320 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
P06320 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC7.29□□□□□ -1.24
P06320 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
P06320 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC7.29□□□□□ -1.24
P06320 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
P06320 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC7.29□□□□□ -1.24
P06320 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC7.29□□□□□ -1.24
P06320 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Gm9796-201ENSMUST00000062249 2250 ntBASIC7.29□□□□□ -1.24
P06320 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
P06320 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
P06320 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC7.28□□□□□ -1.24
P06320 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
P06320 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
P06320 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms