Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
TcraP01849 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.45□□□□□ -1.06
TcraP01849 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC8.45□□□□□ -1.06
TcraP01849 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Gm44958-201ENSMUST00000203734 736 ntBASIC8.45□□□□□ -1.06
TcraP01849 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
TcraP01849 Gm10012-201ENSMUST00000078252 192 ntBASIC8.45□□□□□ -1.06
TcraP01849 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
TcraP01849 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
TcraP01849 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
TcraP01849 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
TcraP01849 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
TcraP01849 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
TcraP01849 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
TcraP01849 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Gm18986-201ENSMUST00000216029 1986 ntBASIC8.44□□□□□ -1.06
TcraP01849 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TcraP01849 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
TcraP01849 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Gm13492-201ENSMUST00000119772 665 ntBASIC8.44□□□□□ -1.06
TcraP01849 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Gm23119-201ENSMUST00000158610 140 ntBASIC8.44□□□□□ -1.06
TcraP01849 Gm38092-201ENSMUST00000195600 653 ntBASIC8.44□□□□□ -1.06
TcraP01849 Gm5904-201ENSMUST00000210286 865 ntBASIC8.44□□□□□ -1.06
TcraP01849 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TcraP01849 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TcraP01849 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TcraP01849 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Gm13127-201ENSMUST00000118978 1389 ntBASIC8.44□□□□□ -1.06
TcraP01849 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
TcraP01849 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
TcraP01849 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TcraP01849 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms